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Pfam Domains mapped on to the structure: 3DCX

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF08000 Protein of unknown function (DUF1696) PF08000 PF08000

Conserved Domain Database Superfamily Annotations: 3DCX

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 3DCX 203837 cl06850 DUF1696 superfamily - -
Structural Details of PDB entry 3DCX

Structural Details of PDB entry 3DCX

PDBid Chains Hinge Swapped Domain
3DCX A,D,C,E,B A:108-110,D:108-110,C:108-110,E:108-110,B:108-110 A:111-124,D:111-124,C:111-124,E:111-124,B:111-124

Swapped-domain interface residues and interactions:

Chains Residues
A 25, 26, 28, 29, 49, 70, 113, 116, 117, 120, 121, 123, 124,
B 25, 26, 28, 29, 49, 70, 113, 116, 117, 120, 121, 123, 124,
C 25, 26, 28, 29, 113, 116, 117, 120, 121, 124,
D 25, 26, 28, 29, 49, 113, 116, 117, 120, 121,
E 25, 26, 28, 29, 49, 70, 113, 116, 117, 120, 121, 124,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 24, 50, 62, 63, 64, 65, 66, 67, 68, 72, 73, 75, 76, 77, 78, 79, 80, 81, 82, 83, 94, 95, 96, 97, 98, 99,
B 24, 50, 57, 62, 63, 64, 65, 66, 67, 68, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 85, 86, 95, 96, 97, 98, 99, 100,
C 24, 30, 49, 50, 62, 63, 64, 65, 66, 67, 68, 70, 73, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 94, 95, 96, 97, 98, 99,
D 24, 50, 62, 63, 64, 65, 66, 67, 68, 70, 73, 75, 76, 77, 78, 79, 80, 81, 83, 94, 95, 96, 97, 98, 99, 100,
E 24, 50, 62, 63, 64, 65, 66, 67, 68, 72, 73, 75, 76, 77, 78, 79, 80, 81, 94, 95, 96, 97, 98, 99, 100,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
DNo mutationNo mutationNo mutationNo mutation
CNo mutationNo mutationNo mutationNo mutation
ENo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:3DCX B:3DCX C:3DCX D:3DCX E:3DCX

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:3DCX.ali
atm file:3DCX.atm
cof file:3DCX.cof
hbd file:3DCX.hbd
html file:3DCX.html
pdb file:3DCX.pdb
ps file:3DCX.ps
psa file:3DCX.psa
rtf file:3DCX.rtf
sst file:3DCX.sst
tem file:3DCX.tem