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Pfam Domains mapped on to the structure: 3D3R

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF01455 HupF/HypC family PF01455 PF01455

Conserved Domain Database Superfamily Annotations: 3D3R

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 3D3R 207030 cl00394 HupF_HypC superfamily - -
Structural Details of PDB entry 3D3R

Structural Details of PDB entry 3D3R

PDBid Chains Hinge Swapped Domain
3D3R A,B A:49-51,B:49-51 A:52-76,B:52-76

Swapped-domain interface residues and interactions:

Chains Residues
A 5, 2, 4, 6, 34, 36, 43, 44, 45, 46, 47, 48, 49, 50, 52, 54, 55, 56, 58, 61, 62, 65, 68, 69, 71, 72, 76,
B 3, 2, 6, 34, 36, 37, 39, 44, 45, 46, 47, 48, 49, 52, 54, 55, 56, 58, 61, 62, 65, 68, 69, 72,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 3, 5, 24, 30, 31, 33, 37, 39, 42, 51,
B 3, 4, 5, 24, 30, 42, 43, 50, 51,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:3D3R B:3D3R

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:3D3R.ali
atm file:3D3R.atm
cof file:3D3R.cof
hbd file:3D3R.hbd
html file:3D3R.html
pdb file:3D3R.pdb
ps file:3D3R.ps
psa file:3D3R.psa
rtf file:3D3R.rtf
sst file:3D3R.sst
tem file:3D3R.tem