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Pfam Domains mapped on to the structure: 3D2R

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF10436 Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase PF10436 PF10436
2 A PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PF02518 PF02518

Conserved Domain Database Superfamily Annotations: 3D2R

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 3D2R 28956 cd00075 HATPase_c - cl00075
2 3D2R 206820 cl00075 HATPase_c superfamily - -
3 3D2R 204489 cl11087 BCDHK_Adom3 superfamily - -
Structural Details of PDB entry 3D2R

Structural Details of PDB entry 3D2R

PDBid Chains Hinge Swapped Domain
3D2R A,B A:373-375,B:373-375 A:376-397,B:376-397

Swapped-domain interface residues and interactions:

Chains Residues
A 374, 375, 376, 377, 379, 381, 393, 394, 395, 396, 397,
B 374, 375, 376, 377, 379, 381, 385, 394, 395, 396,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 34, 157, 160, 161, 164, 230, 232, 279, 281, 283, 285, 286, 288, 290, 299, 300, 301, 345, 347, 349, 351, 352, 353, 354, 355, 356, 359, 361, 363, 365,
B 34, 157, 160, 161, 164, 230, 232, 279, 281, 283, 285, 286, 288, 290, 299, 300, 301, 345, 347, 351, 352, 353, 354, 355, 356, 359, 361, 363, 365,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:3D2R B:3D2R

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:3D2R.ali
atm file:3D2R.atm
cof file:3D2R.cof
hbd file:3D2R.hbd
html file:3D2R.html
pdb file:3D2R.pdb
ps file:3D2R.ps
psa file:3D2R.psa
rtf file:3D2R.rtf
sst file:3D2R.sst
tem file:3D2R.tem