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Pfam Domains mapped on to the structure: 3CTR

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF08675 RNA binding domain PF08675 PF08675

Gene Ontology Annotations: 3CTR

No. GO ID GO Description Linkout - AmiGO
1 GO:0005737 cytoplasm GO:0005737

Conserved Domain Database Superfamily Annotations: 3CTR

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 3CTR 117248 cl07335 RNA_bind superfamily - -
Structural Details of PDB entry 3CTR

Structural Details of PDB entry 3CTR

PDBid Chains Hinge Swapped Domain
3CTR A,B A:487-491,B:487-491 A:492-514,B:492-514

Swapped-domain interface residues and interactions:

Chains Residues
A 447, 448, 449, 450, 451, 453, 494, 503, 504, 505, 506, 507, 508, 509, 512, 514,
B 447, 448, 449, 450, 451, 453, 494, 503, 504, 505, 506, 507, 508, 509, 512,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 446, 456, 464, 465, 467, 468, 482, 487, 489, 490, 491,
B 446, 456, 464, 465, 467, 468, 482, 487, 489, 490, 491,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:3CTR B:3CTR

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:3CTR.ali
atm file:3CTR.atm
cof file:3CTR.cof
hbd file:3CTR.hbd
html file:3CTR.html
pdb file:3CTR.pdb
ps file:3CTR.ps
psa file:3CTR.psa
rtf file:3CTR.rtf
sst file:3CTR.sst
tem file:3CTR.tem