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Pfam Domains mapped on to the structure: 3CM4

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF03102 NeuB family PF03102 PF03102
2 A PF08666 SAF domain PF08666 PF08666

Gene Ontology Annotations: 3CM4

No. GO ID GO Description Linkout - AmiGO
1 GO:0016051 carbohydrate biosynthetic process GO:0016051

Conserved Domain Database Superfamily Annotations: 3CM4

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 3CM4 212160 cd11615 SAF_NeuB_like - cl00555
2 3CM4 212235 cl00555 SAF superfamily - -
3 3CM4 207079 cl00496 NeuB superfamily - -
4 3CM4 207079 cl00496 NeuB superfamily - -
Structural Details of PDB entry 3CM4

Structural Details of PDB entry 3CM4

PDBid Chains Hinge Swapped Domain
3CM4 A,B A:271-277,B:271-277 A:278-349,B:278-349

Swapped-domain interface residues and interactions:

Chains Residues
A 62, 63, 64, 66, 67, 70, 72, 73, 133, 134, 137, 157, 184, 185, 279, 281, 282, 284, 285, 286, 288, 289, 290, 291, 296, 311, 312, 313, 314, 315, 317, 322, 323, 325, 326, 340, 342, 349,
B 62, 63, 64, 66, 67, 70, 72, 73, 133, 134, 137, 157, 184, 185, 279, 281, 282, 284, 285, 286, 288, 289, 290, 291, 296, 311, 312, 313, 314, 315, 317, 322, 323, 325, 326, 340, 342,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 60, 61, 71, 79, 112, 114, 136, 138, 139, 142, 158, 159, 160, 165, 181, 183, 186, 190, 191, 192, 194, 195, 196, 197, 200, 220, 221, 223, 224, 227, 228, 262, 263, 266, 267, 269, 270, 272, 273, 274, 275, 276, 277,
B 60, 61, 71, 79, 112, 114, 136, 138, 139, 142, 158, 159, 160, 165, 181, 183, 186, 190, 191, 192, 194, 195, 196, 197, 200, 220, 221, 223, 224, 227, 228, 262, 263, 266, 267, 269, 270, 272, 273, 274, 275, 276, 277,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:3CM4 B:3CM4

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:3CM4.ali
atm file:3CM4.atm
cof file:3CM4.cof
hbd file:3CM4.hbd
html file:3CM4.html
pdb file:3CM4.pdb
ps file:3CM4.ps
psa file:3CM4.psa
rtf file:3CM4.rtf
sst file:3CM4.sst
tem file:3CM4.tem