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Pfam Domains mapped on to the structure: 3BIO

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF02629 CoA binding domain PF02629 PF02629
2 A PF01408 Oxidoreductase family, NAD-binding Rossmann fold PF01408 PF01408
3 A PF01118 Semialdehyde dehydrogenase, NAD binding domain PF01118 PF01118

Gene Ontology Annotations: 3BIO

No. GO ID GO Description Linkout - AmiGO
1 GO:0016491 oxidoreductase activity GO:0016491

Conserved Domain Database Superfamily Annotations: 3BIO

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 3BIO 212616 NADB_Rossmann superfamily C -
2 3BIO 212616 NADB_Rossmann superfamily C -
Structural Details of PDB entry 3BIO

Structural Details of PDB entry 3BIO

PDBid Chains Hinge Swapped Domain
3BIO A,B A:280-284,B:280-284 A:285-301,B:285-301

Swapped-domain interface residues and interactions:

Chains Residues
A 100, 129, 130, 132, 133, 134, 137, 281, 282, 285, 286, 288, 289, 293, 294, 296, 297, 298, 300,
B 100, 129, 130, 132, 133, 134, 137, 281, 282, 285, 286, 288, 289, 293, 294, 296, 297, 298, 300,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 23, 24, 27, 96, 99, 103, 127, 131, 136, 138, 140, 141, 239, 240, 241, 242, 245, 246, 248, 249, 250, 252, 253, 254, 257, 258, 261, 262, 265, 279, 284,
B 23, 24, 27, 96, 99, 103, 127, 131, 136, 138, 140, 141, 239, 240, 241, 242, 245, 246, 248, 249, 250, 252, 253, 254, 257, 258, 261, 262, 265, 279, 284,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:3BIO B:3BIO

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:3BIO.ali
atm file:3BIO.atm
cof file:3BIO.cof
hbd file:3BIO.hbd
html file:3BIO.html
pdb file:3BIO.pdb
ps file:3BIO.ps
psa file:3BIO.psa
rtf file:3BIO.rtf
sst file:3BIO.sst
tem file:3BIO.tem