Conserved Domain Database Superfamily Annotations: 3BED

No.	PDB ID	PSSM ID	CDD Accession	Superfamily Short Name	Linkout - CDD
1	3BED	206789	cl00025	PTS_IIA_man	superfamily - -

Structural Details of PDB entry 3BED PDBid Chains Hinge Swapped Domain 3BED A,B A:122-124,B:122-124 A:125-132,B:125-132 Swapped-domain interface residues and interactions: Chains Residues A 88, 89, 90, 112, 116, 125, 126, 128, 132, B 12, 88, 89, 90, 120, 125, 126, Non-swapped-domain interface residues and interactions: Chains Residues A 10, 11, 12, 16, 20, 24, 66, 67, 73, 91, 92, 93, 94, 95, 98, 119, 120, 122, 123, 124, B 10, 11, 16, 20, 24, 66, 67, 73, 81, 91, 92, 93, 94, 95, 98, 112, 116, 119, 122, 123, 124,

Swapped domains are represented using trasperent spheres. Non-swapped part is represented using light color and cartoon representation. Hinge region is shown in yellow color.

Mutations in critical regions:

Chains	Hinge	Domain swapped interface	Non-swapped interface	Swapped Domain
A	No mutation	No mutation	No mutation	No mutation
B	No mutation	No mutation	No mutation	No mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

2D-plot:

A:3BED

B:3BED

JOY Structural annotation for hinge hinge and swapped domain:

Hinge	Swapped domain

JOY output:

ali file:	3BED.ali
atm file:	3BED.atm
cof file:	3BED.cof
hbd file:	3BED.hbd
html file:	3BED.html
pdb file:	3BED.pdb
ps file:	3BED.ps
psa file:	3BED.psa
rtf file:	3BED.rtf
sst file:	3BED.sst
tem file:	3BED.tem