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Pfam Domains mapped on to the structure: 3BB6

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF09313 Domain of unknown function (DUF1971) PF09313 PF09313

Conserved Domain Database Superfamily Annotations: 3BB6

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 3BB6 207416 cl01451 DUF1971 superfamily - -
Structural Details of PDB entry 3BB6

Structural Details of PDB entry 3BB6

PDBid Chains Hinge Swapped Domain
3BB6 A,D,C,B A:100-102,D:100-102,C:100-102,B:100-102 A:103-109,D:103-109,C:103-109,B:103-109

Swapped-domain interface residues and interactions:

Chains Residues
A 104, 105, 107, 108, 109,
B 104, 105, 107, 108, 109,
C 29, 30, 31, 33, 34, 58, 105,
D 29, 30, 31, 32, 33, 34, 58, 103,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 3, 4, 5, 6, 8, 9, 10, 11, 12, 13, 16, 18, 33, 34, 36, 39, 42, 44, 45, 47, 71, 72, 73, 74, 93, 95, 97, 99, 100,
B 3, 4, 6, 8, 9, 10, 11, 12, 13, 15, 16, 18, 19, 20, 22, 23, 24, 33, 34, 36, 39, 42, 44, 45, 47, 71, 72, 73, 74, 93, 95, 97, 99, 100, 110,
C 3, 4, 6, 8, 10, 11, 12, 13, 15, 16, 18, 35, 36, 42, 44, 45, 47, 59, 71, 72, 73, 74, 82, 93, 95, 97, 99, 111, 112, 113,
D 3, 4, 6, 8, 10, 11, 12, 13, 15, 16, 18, 35, 36, 42, 44, 45, 47, 71, 72, 73, 74, 82, 93, 95, 97, 99,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
DNo mutationNo mutationNo mutationNo mutation
CNo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:3BB6 B:3BB6 C:3BB6 D:3BB6

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:3BB6.ali
atm file:3BB6.atm
cof file:3BB6.cof
hbd file:3BB6.hbd
html file:3BB6.html
pdb file:3BB6.pdb
ps file:3BB6.ps
psa file:3BB6.psa
rtf file:3BB6.rtf
sst file:3BB6.sst
tem file:3BB6.tem