Conserved Domain Database Superfamily Annotations: 3B8F

No.	PDB ID	PSSM ID	CDD Accession	Superfamily Short Name	Linkout - CDD
1	3B8F	29826	cd01283	cytidine_deaminase -	cl00269
2	3B8F	206945	cl00269	cytidine_deaminase-like	superfamily - -

Structural Details of PDB entry 3B8F PDBid Chains Hinge Swapped Domain 3B8F A,D,C,B A:41-43,D:41-43,C:41-43,B:41-43;A:51-53,D:51-53,C:51-53,B:51-53 A:44-50,D:44-50,C:44-50,B:44-50 Swapped-domain interface residues and interactions: Chains Residues Non-swapped-domain interface residues and interactions: Chains Residues A 75, 77, 84, 86, 87, 89, 90, 91, 93, 94, 107, 108, 110, 117, 121, 122, 123, 124, 125, 127, 129, 130, 131, 134, 142, B 75, 77, 84, 86, 87, 89, 90, 91, 93, 94, 107, 108, 110, 117, 121, 122, 123, 124, 125, 127, 129, 130, 131, 134,

Swapped domains are represented using trasperent spheres. Non-swapped part is represented using light color and cartoon representation. Hinge region is shown in yellow color.

Mutations in critical regions:

Chains	Hinge	Domain swapped interface	Non-swapped interface	Swapped Domain
A	No mutation	No mutation	No mutation	No mutation
D	No mutation	No mutation	No mutation	No mutation
C	No mutation	No mutation	No mutation	No mutation
B	No mutation	No mutation	No mutation	No mutation
D	No mutation	No mutation	No mutation	No mutation
C	No mutation	No mutation	No mutation	No mutation
B	No mutation	No mutation	No mutation	No mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

2D-plot:

B:3B8F

C:3B8F

D:3B8F

A:3B8F

JOY Structural annotation for hinge hinge and swapped domain:

Hinge	Swapped domain

JOY output:

ali file:	3B8F.ali
atm file:	3B8F.atm
cof file:	3B8F.cof
hbd file:	3B8F.hbd
html file:	3B8F.html
pdb file:	3B8F.pdb
ps file:	3B8F.ps
psa file:	3B8F.psa
rtf file:	3B8F.rtf
sst file:	3B8F.sst
tem file:	3B8F.tem