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Pfam Domains mapped on to the structure: 3B5K

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF02025 Interleukin 5 PF02025 PF02025

Gene Ontology Annotations: 3B5K

No. GO ID GO Description Linkout - AmiGO
1 GO:0005576 extracellular region GO:0005576

Conserved Domain Database Superfamily Annotations: 3B5K

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 3B5K 202094 cl03408 IL5 superfamily - -
Structural Details of PDB entry 3B5K

Structural Details of PDB entry 3B5K

PDBid Chains Hinge Swapped Domain
3B5K A,B A:87-89,B:87-89 A:90-111,B:90-110

Swapped-domain interface residues and interactions:

Chains Residues
A 8, 11, 15, 26, 31, 32, 33, 34, 35, 41, 90, 91, 92, 93, 94, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 110, 111,
B 8, 11, 15, 26, 29, 31, 32, 33, 34, 35, 41, 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 18, 22, 25, 28, 29, 36, 37, 38, 39, 40, 42, 43, 44, 45, 47, 48, 52, 55, 72, 75, 78, 79, 82, 83, 85, 86, 87, 89,
B 7, 14, 18, 22, 25, 28, 36, 37, 38, 39, 40, 42, 43, 44, 45, 46, 47, 48, 51, 52, 54, 55, 72, 75, 78, 79, 82, 83, 85, 86, 87, 89,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationLEU(31)MET, LEU(107)MET, No mutationLEU(107)MET,
BNo mutationLEU(31)MET, LEU(107)MET, THR(7)MET, LEU(107)MET,

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:3B5K B:3B5K

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:3B5K.ali
atm file:3B5K.atm
cof file:3B5K.cof
hbd file:3B5K.hbd
html file:3B5K.html
pdb file:3B5K.pdb
ps file:3B5K.ps
psa file:3B5K.psa
rtf file:3B5K.rtf
sst file:3B5K.sst
tem file:3B5K.tem