Pfam Domains mapped on to the structure: 2Z4V
No.
Chain ID
Pfam ID
Pfam Description
Linkout - Pfam
Linkout - CDD
1
A
PF00348
Polyprenyl synthetase
PF00348
PF00348
Conserved Domain Database Superfamily Annotations: 2Z4V
Structural Details of PDB entry 2Z4V
Structural Details of PDB entry 2Z4V
PDBid
Chains
Hinge
Swapped Domain
2Z4V
A,B
A:18-20,B:18-20
A:4-17,B:4-17
Swapped-domain interface residues and interactions:
Chains
Residues
A
6 , 7 , 10 , 11 , 13 , 14 , 15 , 16 , 201 , 204 , 205 ,
B
6 , 7 , 10 , 11 , 13 , 14 , 15 , 16 , 201 , 204 , 205 ,
Non-swapped-domain interface residues and interactions:
Chains
Residues
A
18 , 19 , 20 , 24 , 27 , 28 , 30 , 79 , 82 , 83 , 99 , 101 , 102 , 103 , 105 , 106 , 109 , 110 , 112 , 113 , 114 , 116 , 117 , 120 , 126 , 127 , 129 , 130 , 133 , 137 , 138 , 140 , 141 , 142 , 144 , 145 , 148 , 149 , 151 , 152 , 155 , 156 , 160 , 168 , 169 , 172 , 173 , 180 , 208 , 296 , 299 , 300 , 303 , 312 , 339 ,
B
18 , 19 , 20 , 24 , 27 , 28 , 30 , 79 , 82 , 83 , 99 , 101 , 102 , 103 , 105 , 106 , 109 , 110 , 112 , 113 , 114 , 116 , 117 , 120 , 126 , 127 , 129 , 130 , 133 , 136 , 137 , 138 , 140 , 141 , 142 , 144 , 145 , 148 , 149 , 151 , 152 , 155 , 156 , 160 , 168 , 169 , 172 , 173 , 180 , 208 , 296 , 299 , 300 , 303 , 311 , 312 ,
Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.
Mutations in critical regions:
Chains
Hinge
Domain swapped interface
Non-swapped interface
Swapped Domain
A No mutation No mutation No mutation No mutation
B No mutation No mutation No mutation No mutation
HIDE output:
JMOL Visualization:
2D-plot:
JOY Structural annotation for hinge hinge and swapped domain:
JOY output: