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Pfam Domains mapped on to the structure: 2VRP

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF00059 Lectin C-type domain PF00059 PF00059
2 B PF00059 Lectin C-type domain PF00059 PF00059

Conserved Domain Database Superfamily Annotations: 2VRP

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 2VRP 207592 cl02432 CLECT superfamily - -
Structural Details of PDB entry 2VRP

Structural Details of PDB entry 2VRP

PDBid Chains Hinge Swapped Domain
2VRP A,B A:76-85,B:70-77 A:86-136,B:78-123

Swapped-domain interface residues and interactions:

Chains Residues
A 41, 44, 46, 47, 73, 74, 75, 76, 87, 88, 89, 91, 92, 94, 95, 96, 97, 98, 99, 100, 101, 104, 105, 113, 116, 117, 118, 119, 120, 122, 136,
B 38, 41, 42, 43, 44, 67, 68, 72, 78, 79, 80, 81, 83, 85, 87, 89, 90, 91, 93, 95, 97, 104, 105, 106, 108,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 30, 45, 48, 51, 77, 78, 82, 83, 84,
B 45, 48, 69, 71, 74, 75, 76, 77,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:2VRP B:2VRP

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:2VRP.ali
atm file:2VRP.atm
cof file:2VRP.cof
hbd file:2VRP.hbd
html file:2VRP.html
pdb file:2VRP.pdb
ps file:2VRP.ps
psa file:2VRP.psa
rtf file:2VRP.rtf
sst file:2VRP.sst
tem file:2VRP.tem