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Pfam Domains mapped on to the structure: 2VJV

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF01797 Transposase IS200 like PF01797 PF01797

Conserved Domain Database Superfamily Annotations: 2VJV

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 2VJV 207217 cl00848 Y1_Tnp superfamily - -
Structural Details of PDB entry 2VJV

Structural Details of PDB entry 2VJV

PDBid Chains Hinge Swapped Domain
2VJV A,B A:116-119,B:116-119 A:120-130,B:120-130

Swapped-domain interface residues and interactions:

Chains Residues
A 22, 66, 124, 127, 128, 130,
B 22, 66, 124, 127, 128, 129,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 7, 12, 13, 14, 16, 17, 19, 20, 59, 61, 64, 73, 74, 77, 78, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118,
B 7, 12, 13, 14, 16, 17, 19, 20, 61, 64, 73, 74, 77, 78, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:2VJV B:2VJV

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:2VJV.ali
atm file:2VJV.atm
cof file:2VJV.cof
hbd file:2VJV.hbd
html file:2VJV.html
pdb file:2VJV.pdb
ps file:2VJV.ps
psa file:2VJV.psa
rtf file:2VJV.rtf
sst file:2VJV.sst
tem file:2VJV.tem