Home BrowseSearch Help Group

Pfam Domains mapped on to the structure: 2V5J

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF03328 HpcH/HpaI aldolase/citrate lyase family PF03328 PF03328

Gene Ontology Annotations: 2V5J

No. GO ID GO Description Linkout - AmiGO
1 GO:0006725 cellular aromatic compound metabolic process GO:0006725

Conserved Domain Database Superfamily Annotations: 2V5J

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 2V5J 208991 cl09155 Pyruvate_Kinase superfamily - -
2 2V5J 208991 cl09155 Pyruvate_Kinase superfamily - -
3 2V5J 208991 cl09155 Pyruvate_Kinase superfamily - -
Structural Details of PDB entry 2V5J

Structural Details of PDB entry 2V5J

PDBid Chains Hinge Swapped Domain
2V5J A,B A:233-235,B:233-235 A:236-259,B:236-259

Swapped-domain interface residues and interactions:

Chains Residues
A 16, 30, 31, 34, 35, 36, 37, 236, 238, 239, 240, 242, 243, 244, 246, 247, 249, 250, 251, 253, 254, 256, 257, 258,
B 14, 16, 30, 31, 34, 35, 36, 216, 220, 223, 224, 236, 238, 239, 240, 242, 243, 244, 246, 247, 249, 250, 252,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 21, 22, 24, 26, 27, 33, 47, 216, 220, 232,
B 8, 12, 21, 22, 24, 26, 27, 33, 47, 214, 219, 232,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:2V5J B:2V5J

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:2V5J.ali
atm file:2V5J.atm
cof file:2V5J.cof
hbd file:2V5J.hbd
html file:2V5J.html
pdb file:2V5J.pdb
ps file:2V5J.ps
psa file:2V5J.psa
rtf file:2V5J.rtf
sst file:2V5J.sst
tem file:2V5J.tem