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Pfam Domains mapped on to the structure: 2RK0

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PF00903 PF00903
2 A PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PF13669 PF13669
3 A PF12681 Glyoxalase-like domain PF12681 PF12681

Conserved Domain Database Superfamily Annotations: 2RK0

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 2RK0 176666 cd07242 Glo_EDI_BRP_like_6 - cl14632
2 2RK0 211465 cl14632 Glo_EDI_BRP_like superfamily - -
3 2RK0 211465 cl14632 Glo_EDI_BRP_like superfamily - -
Structural Details of PDB entry 2RK0

Structural Details of PDB entry 2RK0

PDBid Chains Hinge Swapped Domain
2RK0 A,B A:13-16,B:13-16 A:2-12,B:2-12

Swapped-domain interface residues and interactions:

Chains Residues
A 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 48, 49, 51, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 85,
B 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 48, 49, 51, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 85,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 27, 47, 56, 58, 60, 61, 62, 64, 65, 66, 67, 118, 120, 136,
B 27, 47, 56, 58, 61, 64, 65, 66, 89, 120,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:2RK0 B:2RK0

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:2RK0.ali
atm file:2RK0.atm
cof file:2RK0.cof
hbd file:2RK0.hbd
html file:2RK0.html
pdb file:2RK0.pdb
ps file:2RK0.ps
psa file:2RK0.psa
rtf file:2RK0.rtf
sst file:2RK0.sst
tem file:2RK0.tem