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Conserved Domain Database Superfamily Annotations: 2RBF

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 2RBF 210183 RHH_1 superfamily C -
Structural Details of PDB entry 2RBF

Structural Details of PDB entry 2RBF

PDBid Chains Hinge Swapped Domain
2RBF A,B A:36-37,B:36-37 A:38-46,B:38-48

Swapped-domain interface residues and interactions:

Chains Residues
A 21, 36, 38, 39, 40, 41, 43, 44, 45, 46,
B 36, 38, 39, 40, 41, 42, 43, 44, 45, 47,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 3, 4, 5, 6, 7, 8, 9, 10, 14, 15, 17, 18, 24, 25, 29, 30, 32, 33, 34, 35, 37,
B 4, 5, 6, 7, 8, 9, 10, 11, 14, 15, 17, 18, 21, 24, 25, 30, 32, 33, 34, 35, 37,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:2RBF B:2RBF

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:2RBF.ali
atm file:2RBF.atm
cof file:2RBF.cof
hbd file:2RBF.hbd
html file:2RBF.html
pdb file:2RBF.pdb
ps file:2RBF.ps
psa file:2RBF.psa
rtf file:2RBF.rtf
sst file:2RBF.sst
tem file:2RBF.tem