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Pfam Domains mapped on to the structure: 2R28

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF00036 EF hand PF00036 PF00036
2 A PF00036 EF hand PF00036 PF00036
3 A PF00036 EF hand PF00036 PF00036
4 A PF00036 EF hand PF00036 PF00036
5 A PF13499 EF-hand domain pair PF13499 PF13499
6 A PF13499 EF-hand domain pair PF13499 PF13499
7 A PF13833 EF-hand domain pair PF13833 PF13833
8 A PF13833 EF-hand domain pair PF13833 PF13833
9 A PF13833 EF-hand domain pair PF13833 PF13833
10 A PF08726 Ca2+ insensitive EF hand PF08726 PF08726
11 A PF12763 Cytoskeletal-regulatory complex EF hand PF12763 PF12763
Structural Details of PDB entry 2R28

Structural Details of PDB entry 2R28

PDBid Chains Hinge Swapped Domain
2R28 A,B A:78-82,B:78-82 A:83-148,B:83-148

Swapped-domain interface residues and interactions:

Chains Residues
A 19, 39, 40, 84, 91, 92, 95, 109, 112, 113, 114, 148,
B 19, 22, 39, 40, 41, 84, 91, 92, 95, 112, 113, 114,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 22, 35, 36, 41,
B 35,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:2R28 B:2R28

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:2R28.ali
atm file:2R28.atm
cof file:2R28.cof
hbd file:2R28.hbd
html file:2R28.html
pdb file:2R28.pdb
ps file:2R28.ps
psa file:2R28.psa
rtf file:2R28.rtf
sst file:2R28.sst
tem file:2R28.tem