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Pfam Domains mapped on to the structure: 2QSC

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 L PF13927 Immunoglobulin domain PF13927 PF13927
2 L PF13927 Immunoglobulin domain PF13927 PF13927
3 L PF00047 Immunoglobulin domain PF00047 PF00047
4 H PF13927 Immunoglobulin domain PF13927 PF13927
Structural Details of PDB entry 2QSC

Structural Details of PDB entry 2QSC

PDBid Chains Hinge Swapped Domain
2QSC H,L H:42-46,L:41-45 H:1-41,L:1-40

Swapped-domain interface residues and interactions:

Chains Residues
H 35, 39,
L 32, 34, 36, 38,

Non-swapped-domain interface residues and interactions:

Chains Residues
H 44, 45, 47, 50, 58, 91, 98, 100, 101, 103, 104, 105, 122, 123, 124, 125, 126, 127, 137, 139, 143, 145, 172, 173, 174, 175, 177, 178, 179, 188, 190, 192, 221,
L 41, 42, 43, 44, 46, 49, 50, 55, 87, 89, 91, 94, 95, 96, 98, 99, 100, 116, 118, 119, 121, 123, 124, 127, 129, 131, 133, 135, 137, 138, 160, 161, 162, 163, 164, 167, 174, 176, 178, 180, 214,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
HNo mutationNo mutationNo mutationNo mutation
LNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

H:2QSC

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:2QSC.ali
atm file:2QSC.atm
cof file:2QSC.cof
hbd file:2QSC.hbd
html file:2QSC.html
pdb file:2QSC.pdb
ps file:2QSC.ps
psa file:2QSC.psa
rtf file:2QSC.rtf
sst file:2QSC.sst
tem file:2QSC.tem