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Pfam Domains mapped on to the structure: 2QNC

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF02945 Recombination endonuclease VII PF02945 PF02945

Conserved Domain Database Superfamily Annotations: 2QNC

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 2QNC 202480 cl03794 Endonuclease_7 superfamily - -
2 2QNC 149982 cl07663 Endonuc-dimeris superfamily - -
3 2QNC 149982 cl07663 Endonuc-dimeris superfamily - -
Structural Details of PDB entry 2QNC

Structural Details of PDB entry 2QNC

PDBid Chains Hinge Swapped Domain
2QNC A,B A:99-107,B:99-107 A:108-157,B:108-157

Swapped-domain interface residues and interactions:

Chains Residues
A 2, 45, 51, 108, 109, 111, 112, 115, 153, 156, 157,
B 1, 2, 45, 51, 108, 109, 111, 112, 115, 153, 156,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 1, 3, 8, 11, 15, 24, 25, 26, 27, 28, 41, 43, 46, 48, 49, 50, 52, 53, 54, 57, 60, 61, 64, 65, 67, 68, 71, 75, 76, 77, 80, 82, 84, 85, 87, 88, 89, 90, 91, 92, 94, 95, 96, 99, 100, 102, 103, 104, 105, 106, 107,
B 3, 4, 8, 11, 15, 24, 25, 26, 27, 28, 41, 42, 43, 46, 48, 49, 50, 52, 53, 54, 57, 60, 61, 64, 65, 67, 68, 71, 75, 76, 77, 80, 82, 85, 87, 88, 89, 90, 91, 92, 94, 95, 96, 99, 100, 102, 103, 104, 105, 106, 107,

Swapped domains are represented using trasperent spheres.
Non-swapped part is reprented using light color and cartoon reprentation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo Jmol_logo

2D-plot:

3:2QNC A:2QNC B:2QNC

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:2QNC.ali
atm file:2QNC.atm
cof file:2QNC.cof
hbd file:2QNC.hbd
html file:2QNC.html
pdb file:2QNC.pdb
ps file:2QNC.ps
psa file:2QNC.psa
rtf file:2QNC.rtf
sst file:2QNC.sst
tem file:2QNC.tem