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Pfam Domains mapped on to the structure: 2QM7

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF03308 ArgK protein PF03308 PF03308
2 A PF02492 CobW/HypB/UreG, nucleotide-binding domain PF02492 PF02492
3 A PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain PF01656 PF01656

Conserved Domain Database Superfamily Annotations: 2QM7

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 2QM7 48378 cd03114 ArgK-like - cl09099
2 2QM7 212613 cl09099 P-loop_NTPase superfamily - -
3 2QM7 212613 cl09099 P-loop_NTPase superfamily - -
Structural Details of PDB entry 2QM7

Structural Details of PDB entry 2QM7

PDBid Chains Hinge Swapped Domain
2QM7 A,B A:311-317,B:311-317 A:318-327,B:318-329

Swapped-domain interface residues and interactions:

Chains Residues
A 42, 280, 281, 284, 318, 320, 321, 323, 324, 327,
B 280, 281, 283, 284, 318, 320, 321, 323, 324, 327,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 46, 49, 138, 141, 181, 184, 186, 187, 188, 189, 190, 192, 193, 218, 222, 224, 225, 226, 227, 228, 229, 235, 273, 276, 277, 283, 285, 287, 288, 289, 292, 302, 306, 309, 310, 311, 312, 314, 315, 316, 317,
B 42, 45, 46, 49, 137, 180, 181, 182, 184, 187, 189, 190, 192, 193, 194, 218, 221, 222, 224, 225, 226, 227, 229, 273, 276, 277, 285, 287, 288, 289, 291, 302, 306, 309, 310, 312, 314, 315, 316, 317,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationPHE(192)LEU, HIS(224)ARG, No mutation
BNo mutationNo mutationPHE(192)LEU, HIS(224)ARG, No mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:2QM7 B:2QM7

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:2QM7.ali
atm file:2QM7.atm
cof file:2QM7.cof
hbd file:2QM7.hbd
html file:2QM7.html
pdb file:2QM7.pdb
ps file:2QM7.ps
psa file:2QM7.psa
rtf file:2QM7.rtf
sst file:2QM7.sst
tem file:2QM7.tem