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Pfam Domains mapped on to the structure: 2QIB

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF00440 Bacterial regulatory proteins, tetR family PF00440 PF00440

Conserved Domain Database Superfamily Annotations: 2QIB

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 2QIB 212173 cl00088 HTH superfamily - -
2 2QIB 212173 cl00088 HTH superfamily - -
3 2QIB 212173 cl00088 HTH superfamily - -
Structural Details of PDB entry 2QIB

Structural Details of PDB entry 2QIB

PDBid Chains Hinge Swapped Domain
2QIB A,B A:210-212,B:210-212 A:213-230,B:213-230

Swapped-domain interface residues and interactions:

Chains Residues
A 191, 192, 205, 217, 219, 220, 221, 223, 224, 225, 227, 228, 230,
B 195, 201, 213, 217, 220, 221, 222, 223, 224, 225, 227,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 112, 114, 115, 116, 147, 148, 150, 151, 154, 155, 158, 159, 162, 163, 166, 172, 173, 174, 177, 180, 181, 184, 185, 188, 189, 193, 194, 195, 196, 204, 208,
B 109, 111, 118, 119, 122, 147, 148, 150, 151, 152, 154, 155, 158, 159, 162, 163, 166, 172, 173, 174, 177, 180, 181, 184, 185, 188, 189, 191, 192, 193, 194, 196, 205, 208,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:2QIB B:2QIB

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:2QIB.ali
atm file:2QIB.atm
cof file:2QIB.cof
hbd file:2QIB.hbd
html file:2QIB.html
pdb file:2QIB.pdb
ps file:2QIB.ps
psa file:2QIB.psa
rtf file:2QIB.rtf
sst file:2QIB.sst
tem file:2QIB.tem