Home BrowseSearch Help Group

Pfam Domains mapped on to the structure: 2QGS

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF01966 HD domain PF01966 PF01966

Gene Ontology Annotations: 2QGS

No. GO ID GO Description Linkout - AmiGO
1 GO:0046872 metal ion binding GO:0046872

Conserved Domain Database Superfamily Annotations: 2QGS

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 2QGS 212171 cl00076 HDc superfamily - -
Structural Details of PDB entry 2QGS

Structural Details of PDB entry 2QGS

PDBid Chains Hinge Swapped Domain
2QGS A,B A:126-128,B:126-128;A:148-150,B:148-150 A:129-147,B:129-147

Swapped-domain interface residues and interactions:

Chains Residues
A 23, 25, 130, 131, 133, 134, 137, 138, 141, 142, 144, 146, 204, 207, 208,
B 23, 25, 130, 131, 133, 134, 137, 138, 141, 142, 144, 145, 146, 204, 207, 208, 211,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 22, 28, 31, 32, 35, 36, 38, 39, 193, 197, 200, 211, 212, 214, 215, 216,
B 28, 32, 35, 36, 38, 39, 193, 196, 197, 200, 212, 214, 215, 216,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

B:2QGS A:2QGS

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:2QGS.ali
atm file:2QGS.atm
cof file:2QGS.cof
hbd file:2QGS.hbd
html file:2QGS.html
pdb file:2QGS.pdb
ps file:2QGS.ps
psa file:2QGS.psa
rtf file:2QGS.rtf
sst file:2QGS.sst
tem file:2QGS.tem