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Pfam Domains mapped on to the structure: 2QFC

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF12844 Helix-turn-helix domain PF12844 PF12844
2 A PF01381 Helix-turn-helix PF01381 PF01381
Structural Details of PDB entry 2QFC

Structural Details of PDB entry 2QFC

PDBid Chains Hinge Swapped Domain
2QFC A,B A:73-80,B:73-80 A:3-72,B:3-72

Swapped-domain interface residues and interactions:

Chains Residues
A 5, 12, 61, 64, 65, 68, 69, 72,
B 5, 12, 46, 61, 64, 65, 68, 69, 71, 72,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 73, 87, 108, 147, 149, 227, 230, 231, 232, 233, 235, 239, 262, 265, 266, 269, 270, 286,
B 73, 87, 108, 147, 149, 227, 230, 231, 232, 233, 235, 239, 262, 265, 266, 269, 270,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:2QFC B:2QFC

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:2QFC.ali
atm file:2QFC.atm
cof file:2QFC.cof
hbd file:2QFC.hbd
html file:2QFC.html
pdb file:2QFC.pdb
ps file:2QFC.ps
psa file:2QFC.psa
rtf file:2QFC.rtf
sst file:2QFC.sst
tem file:2QFC.tem