Pfam Domains mapped on to the structure: 2QDN

No.	Chain ID	Pfam ID	Pfam Description	Linkout - Pfam	Linkout - CDD
1	A	PF00229	TNF(Tumour Necrosis Factor) family	PF00229	PF00229

Conserved Domain Database Superfamily Annotations: 2QDN

No.	PDB ID	PSSM ID	CDD Accession	Superfamily Short Name	Linkout - CDD
1	2QDN	206860	cl00147	TNF	superfamily - -

Structural Details of PDB entry 2QDN PDBid Chains Hinge Swapped Domain 2QDN A,B A:167-170,B:167-170 A:171-173,B:171-173 Swapped-domain interface residues and interactions: Chains Residues A 62, 63, 64, 65, 66, 68, 171, 172, 173, B 62, 63, 64, 65, 66, 68, 171, 172, Non-swapped-domain interface residues and interactions: Chains Residues A 51, 53, 55, 67, 90, 92, 94, 121, 122, 123, 124, 125, 129, 131, 132, 133, 134, 135, 160, 164, 166, 167, 168, 169, 170, B 51, 53, 55, 90, 92, 94, 121, 123, 124, 125, 128, 129, 131, 132, 133, 134, 135, 160, 164, 166, 167, 169, 170,

Swapped domains are represented using trasperent spheres. Non-swapped part is represented using light color and cartoon representation. Hinge region is shown in yellow color.

Mutations in critical regions:

Chains	Hinge	Domain swapped interface	Non-swapped interface	Swapped Domain
A	No mutation	No mutation	No mutation	No mutation
B	No mutation	No mutation	No mutation	No mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

2D-plot:

A:2QDN

B:2QDN

JOY Structural annotation for hinge hinge and swapped domain:

Hinge	Swapped domain

JOY output:

ali file:	2QDN.ali
atm file:	2QDN.atm
cof file:	2QDN.cof
hbd file:	2QDN.hbd
html file:	2QDN.html
pdb file:	2QDN.pdb
ps file:	2QDN.ps
psa file:	2QDN.psa
rtf file:	2QDN.rtf
sst file:	2QDN.sst
tem file:	2QDN.tem