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Pfam Domains mapped on to the structure: 2Q8H

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF10436 Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase PF10436 PF10436
2 A PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PF02518 PF02518

Conserved Domain Database Superfamily Annotations: 2Q8H

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 2Q8H 28956 cd00075 HATPase_c - cl00075
2 2Q8H 206820 cl00075 HATPase_c superfamily - -
3 2Q8H 204489 cl11087 BCDHK_Adom3 superfamily - -
Structural Details of PDB entry 2Q8H

Structural Details of PDB entry 2Q8H

PDBid Chains Hinge Swapped Domain
2Q8H A,B A:399-412,B:399-412 A:413-423,B:413-423

Swapped-domain interface residues and interactions:

Chains Residues
A 399, 400, 401, 402, 404, 406, 418, 419, 420, 421, 422, 423,
B 397, 399, 400, 401, 402, 404, 406, 418, 419, 420, 421, 422,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 53, 56, 183, 186, 253, 255, 257, 304, 306, 308, 309, 310, 311, 313, 315, 319, 324, 325, 326, 370, 372, 374, 376, 377, 378, 379, 380, 381, 384, 386, 388, 390, 397, 410,
B 53, 56, 183, 186, 253, 255, 257, 304, 306, 308, 309, 310, 311, 313, 315, 319, 324, 325, 326, 370, 372, 374, 376, 377, 378, 379, 380, 381, 384, 386, 388, 390, 410,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:2Q8H B:2Q8H

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:2Q8H.ali
atm file:2Q8H.atm
cof file:2Q8H.cof
hbd file:2Q8H.hbd
html file:2Q8H.html
pdb file:2Q8H.pdb
ps file:2Q8H.ps
psa file:2Q8H.psa
rtf file:2Q8H.rtf
sst file:2Q8H.sst
tem file:2Q8H.tem