Home BrowseSearch Help Group

Pfam Domains mapped on to the structure: 2Q3D

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF00291 Pyridoxal-phosphate dependent enzyme PF00291 PF00291

Conserved Domain Database Superfamily Annotations: 2Q3D

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 2Q3D 107204 cd01561 CBS_like - cl00342
2 2Q3D 212605 cl00342 Trp-synth-beta_II superfamily - -
3 2Q3D 212605 cl00342 Trp-synth-beta_II superfamily - -
Structural Details of PDB entry 2Q3D

Structural Details of PDB entry 2Q3D

PDBid Chains Hinge Swapped Domain
2Q3D A,B A:260-263,B:260-263 A:264-306,B:264-306

Swapped-domain interface residues and interactions:

Chains Residues
A 287, 295, 297, 298, 300, 305, 306,
B 287, 295, 297, 298, 300, 305,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 1, 2, 3, 4, 5, 6, 7, 10, 15, 16, 17, 18, 20, 21, 31, 34, 36, 37, 39, 40, 41, 84, 85, 87, 101, 104, 105, 108, 109, 110, 165, 166, 167, 169, 256, 257, 259, 260, 261, 262,
B 1, 2, 3, 4, 5, 6, 7, 10, 15, 16, 17, 18, 20, 21, 31, 34, 36, 37, 39, 40, 41, 84, 85, 87, 101, 104, 105, 108, 109, 110, 165, 166, 167, 169, 256, 257, 259, 260, 261, 262,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:2Q3D B:2Q3D

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:2Q3D.ali
atm file:2Q3D.atm
cof file:2Q3D.cof
hbd file:2Q3D.hbd
html file:2Q3D.html
pdb file:2Q3D.pdb
ps file:2Q3D.ps
psa file:2Q3D.psa
rtf file:2Q3D.rtf
sst file:2Q3D.sst
tem file:2Q3D.tem