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Pfam Domains mapped on to the structure: 2PAK

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF05523 WxcM-like, C-terminal PF05523 PF05523

Conserved Domain Database Superfamily Annotations: 2PAK

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 2PAK 212615 cl09118 Cupin_2 superfamily - -
Structural Details of PDB entry 2PAK

Structural Details of PDB entry 2PAK

PDBid Chains Hinge Swapped Domain
2PAK A,B A:22-32,B:22-32 A:2-21,B:2-21

Swapped-domain interface residues and interactions:

Chains Residues
A 10, 13, 14, 15, 16, 17, 18, 19, 20, 21, 33, 34, 35, 36, 37, 38, 39, 40, 41,
B 10, 14, 15, 16, 17, 18, 19, 20, 21, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 44,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 22, 23, 25, 31, 32, 44, 45, 46, 47, 61, 62, 83, 105, 107, 109, 113, 114, 136,
B 22, 23, 25, 31, 32, 45, 46, 61, 62, 83, 105, 107, 109, 113, 114,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:2PAK B:2PAK

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:2PAK.ali
atm file:2PAK.atm
cof file:2PAK.cof
hbd file:2PAK.hbd
html file:2PAK.html
pdb file:2PAK.pdb
ps file:2PAK.ps
psa file:2PAK.psa
rtf file:2PAK.rtf
sst file:2PAK.sst
tem file:2PAK.tem