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Pfam Domains mapped on to the structure: 2OYA

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF00530 Scavenger receptor cysteine-rich domain PF00530 PF00530

Gene Ontology Annotations: 2OYA

No. GO ID GO Description Linkout - AmiGO
1 GO:0016020 membrane GO:0016020

Conserved Domain Database Superfamily Annotations: 2OYA

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 2OYA 207619 cl02509 SRCR superfamily - -
Structural Details of PDB entry 2OYA

Structural Details of PDB entry 2OYA

PDBid Chains Hinge Swapped Domain
2OYA A,B A:426-431,B:426-431 A:417-425,B:417-425

Swapped-domain interface residues and interactions:

Chains Residues
A 419, 420, 421, 422, 423, 424, 425, 432, 433, 435, 437, 461, 462,
B 419, 420, 421, 422, 423, 424, 425, 431, 432, 433, 435, 437, 461, 462, 493,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 426, 427, 428, 429, 430, 431, 442, 458, 473, 492, 493, 495, 515, 518,
B 426, 427, 428, 429, 430, 442, 458, 473, 492, 495, 515,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationLEU(419)-, ALA(420)-, No mutationALA(417)-, PRO(418)-, LEU(419)-, ALA(420)-,
BNo mutationLEU(419)-, ALA(420)-, No mutationALA(417)-, PRO(418)-, LEU(419)-, ALA(420)-,

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:2OYA B:2OYA

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:2OYA.ali
atm file:2OYA.atm
cof file:2OYA.cof
hbd file:2OYA.hbd
html file:2OYA.html
pdb file:2OYA.pdb
ps file:2OYA.ps
psa file:2OYA.psa
rtf file:2OYA.rtf
sst file:2OYA.sst
tem file:2OYA.tem