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Pfam Domains mapped on to the structure: 2OPL

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF02566 OsmC-like protein PF02566 PF02566
2 B PF02566 OsmC-like protein PF02566 PF02566

Conserved Domain Database Superfamily Annotations: 2OPL

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 2OPL 212240 cl00767 OsmC superfamily - -
Structural Details of PDB entry 2OPL

Structural Details of PDB entry 2OPL

PDBid Chains Hinge Swapped Domain
2OPL A,B A:65-69,B:65-69 A:4-64,B:5-64

Swapped-domain interface residues and interactions:

Chains Residues
A 8, 9, 10, 14, 15, 18, 19, 22, 23, 26, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 42, 43, 45, 47, 49, 52, 55, 62, 76, 86, 88, 89, 90, 93, 94, 97, 98, 99, 113, 114, 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 165, 182,
B 5, 8, 9, 10, 11, 14, 15, 18, 19, 22, 23, 26, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 42, 43, 45, 47, 49, 52, 55, 62, 76, 86, 88, 89, 90, 93, 94, 97, 98, 99, 113, 114, 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 140, 178,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 67, 69, 71, 72, 73, 74, 75, 79, 82, 83, 84, 85, 87, 91, 95, 101, 102, 103, 111, 126, 127, 128, 129, 130, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 146, 153, 156, 157, 160, 164, 166, 168, 169, 170, 171, 172, 173, 174, 176, 177, 178, 179, 180, 181, 183, 184,
B 67, 69, 71, 72, 73, 74, 75, 79, 82, 84, 85, 87, 91, 95, 101, 102, 103, 111, 126, 127, 128, 129, 130, 132, 136, 137, 138, 139, 141, 142, 143, 144, 145, 146, 153, 156, 157, 160, 164, 165, 166, 168, 169, 170, 171, 172, 173, 174, 176, 177, 179, 180, 181, 182, 183, 184,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationCSD(56)CYS,
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:2OPL B:2OPL

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:2OPL.ali
atm file:2OPL.atm
cof file:2OPL.cof
hbd file:2OPL.hbd
html file:2OPL.html
pdb file:2OPL.pdb
ps file:2OPL.ps
psa file:2OPL.psa
rtf file:2OPL.rtf
sst file:2OPL.sst
tem file:2OPL.tem