Pfam Domains mapped on to the structure: 2OND
No.
Chain ID
Pfam ID
Pfam Description
Linkout - Pfam
Linkout - CDD
1
A
PF05843
Suppressor of forked protein (Suf)
PF05843
PF05843
Gene Ontology Annotations: 2OND
Structural Details of PDB entry 2OND
Structural Details of PDB entry 2OND
PDBid
Chains
Hinge
Swapped Domain
2OND
A,B
A:515-518,B:515-518
A:519-549,B:519-549
Swapped-domain interface residues and interactions:
Chains
Residues
A
292 , 339 , 341 , 376 , 520 , 521 , 524 , 527 , 528 , 530 , 532 , 533 , 535 , 536 , 540 , 543 , 544 , 549 ,
B
292 , 295 , 339 , 341 , 376 , 520 , 521 , 524 , 527 , 528 , 530 , 532 , 533 , 535 , 536 , 540 , 543 , 544 ,
Non-swapped-domain interface residues and interactions:
Chains
Residues
A
253 , 257 , 290 , 291 , 295 , 296 , 299 , 344 , 345 , 348 , 351 , 352 , 379 , 380 , 383 , 386 , 387 , 408 , 410 , 413 , 414 , 417 , 420 , 421 , 422 , 424 , 452 , 455 , 456 , 458 , 460 , 493 , 494 , 495 , 496 , 497 , 498 , 501 , 502 , 506 , 518 ,
B
253 , 290 , 291 , 296 , 306 , 344 , 345 , 348 , 351 , 352 , 379 , 380 , 383 , 386 , 387 , 408 , 410 , 413 , 414 , 420 , 421 , 422 , 424 , 445 , 452 , 455 , 456 , 458 , 460 , 493 , 494 , 495 , 496 , 497 , 498 , 501 , 518 ,
Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.
Mutations in critical regions:
Chains
Hinge
Domain swapped interface
Non-swapped interface
Swapped Domain
A No mutation No mutation No mutation No mutation
B No mutation No mutation No mutation No mutation
HIDE output:
JMOL Visualization:
2D-plot:
JOY Structural annotation for hinge hinge and swapped domain:
JOY output: