Home BrowseSearch Help Group

Pfam Domains mapped on to the structure: 2OKQ

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF07237 Protein of unknown function (DUF1428) PF07237 PF07237

Conserved Domain Database Superfamily Annotations: 2OKQ

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 2OKQ 154854 cl02319 DUF1428 superfamily - -
2 2OKQ 154854 cl02319 DUF1428 superfamily - -
Structural Details of PDB entry 2OKQ

Structural Details of PDB entry 2OKQ

PDBid Chains Hinge Swapped Domain
2OKQ A,B A:100-105,B:100-105 A:106-116,B:106-116

Swapped-domain interface residues and interactions:

Chains Residues
A 20, 24, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 53, 54, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116,
B 20, 24, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 52, 53, 54, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 3, 1, 3, 4, 6, 8, 16, 23, 27, 28, 31, 37, 51, 52, 57, 59, 68, 70, 72, 76, 79, 104, 105, 117,
B 4, 6, 8, 16, 23, 27, 31, 37, 51, 57, 59, 68, 70, 72, 76, 79, 104, 105,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:2OKQ B:2OKQ

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:2OKQ.ali
atm file:2OKQ.atm
cof file:2OKQ.cof
hbd file:2OKQ.hbd
html file:2OKQ.html
pdb file:2OKQ.pdb
ps file:2OKQ.ps
psa file:2OKQ.psa
rtf file:2OKQ.rtf
sst file:2OKQ.sst
tem file:2OKQ.tem