Pfam Domains mapped on to the structure: 2OBA
No.
Chain ID
Pfam ID
Pfam Description
Linkout - Pfam
Linkout - CDD
1
A
PF01242
6-pyruvoyl tetrahydropterin synthase
PF01242
PF01242
Conserved Domain Database Superfamily Annotations: 2OBA
Structural Details of PDB entry 2OBA
Structural Details of PDB entry 2OBA
PDBid
Chains
Hinge
Swapped Domain
2OBA
A,D,C,B
A:14-17,D:14-17,C:14-17,B:14-17;A:27-30,D:27-30,C:27-30,B:27-30
A:18-26,D:18-26,C:18-26,B:18-26
Swapped-domain interface residues and interactions:
Chains
Residues
A
18 , 22 , 23 , 24 , 26 , 68 , 69 ,
B
18 , 22 , 23 , 24 , 26 , 46 ,
C
18 , 22 , 23 , 26 ,
D
18 , 22 , 23 , 26 , 68 , 69 , 118 ,
E
0 , 68 , 69 ,
F
0 , 46 , 68 , 69 ,
Non-swapped-domain interface residues and interactions:
Chains
Residues
A
1 , 0 , 2 , 3 , 4 , 5 , 6 , 10 , 11 , 12 , 15 , 17 , 27 , 28 , 29 , 30 , 31 , 42 , 45 , 46 , 47 , 48 , 51 , 52 , 53 , 70 , 79 , 81 , 82 , 83 , 84 , 87 , 106 , 108 , 109 , 110 , 111 , 112 , 113 , 114 , 115 , 118 ,
B
2 , 1 , 0 , 2 , 3 , 4 , 5 , 6 , 10 , 11 , 12 , 15 , 17 , 27 , 28 , 29 , 30 , 31 , 42 , 45 , 47 , 48 , 51 , 52 , 53 , 67 , 68 , 69 , 70 , 79 , 81 , 82 , 83 , 84 , 87 , 106 , 107 , 108 , 109 , 110 , 111 , 112 , 113 , 114 , 115 , 118 ,
C
1 , 0 , 2 , 3 , 4 , 5 , 6 , 10 , 11 , 12 , 15 , 17 , 27 , 28 , 29 , 30 , 31 , 42 , 45 , 46 , 47 , 48 , 51 , 52 , 53 , 67 , 68 , 69 , 70 , 79 , 81 , 82 , 83 , 84 , 87 , 106 , 107 , 108 , 109 , 110 , 111 , 112 , 113 , 114 , 115 , 118 ,
D
1 , 0 , 2 , 3 , 4 , 5 , 6 , 10 , 11 , 12 , 15 , 17 , 27 , 28 , 29 , 30 , 31 , 42 , 45 , 46 , 47 , 48 , 51 , 52 , 53 , 67 , 70 , 79 , 81 , 82 , 83 , 84 , 87 , 106 , 107 , 108 , 109 , 110 , 111 , 112 , 113 , 114 , 115 , 116 ,
E
2 , 1 , 2 , 3 , 4 , 5 , 6 , 10 , 11 , 12 , 15 , 17 , 18 , 22 , 23 , 24 , 26 , 27 , 28 , 29 , 30 , 31 , 42 , 44 , 45 , 46 , 47 , 48 , 51 , 52 , 53 , 70 , 79 , 81 , 82 , 83 , 84 , 87 , 106 , 108 , 109 , 110 , 111 , 112 , 113 , 114 , 115 ,
F
1 , 2 , 3 , 4 , 5 , 6 , 10 , 11 , 12 , 15 , 17 , 18 , 22 , 23 , 24 , 26 , 27 , 28 , 29 , 30 , 31 , 42 , 45 , 47 , 48 , 51 , 52 , 53 , 64 , 67 , 70 , 79 , 81 , 82 , 83 , 84 , 87 , 106 , 107 , 108 , 109 , 110 , 111 , 112 , 113 , 114 , 115 , 118 ,
Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.
Mutations in critical regions:
Chains
Hinge
Domain swapped interface
Non-swapped interface
Swapped Domain
A No mutation No mutation No mutation No mutation
D No mutation No mutation No mutation No mutation
C No mutation No mutation No mutation No mutation
B No mutation No mutation No mutation No mutation
D No mutation No mutation No mutation No mutation
C No mutation No mutation No mutation No mutation
B No mutation No mutation No mutation No mutation
HIDE output:
JMOL Visualization:
2D-plot:
JOY Structural annotation for hinge hinge and swapped domain:
JOY output: