Home BrowseSearch Help Group

Pfam Domains mapped on to the structure: 2O72

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF00028 Cadherin domain PF00028 PF00028
2 A PF00028 Cadherin domain PF00028 PF00028

Conserved Domain Database Superfamily Annotations: 2O72

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 2O72 206635 cd00031 CA_like - cl15786
2 2O72 211469 cl15786 CA_like superfamily - -
3 2O72 206637 cd11304 Cadherin_repeat - cl15786
4 2O72 211469 cl15786 CA_like superfamily - -
Structural Details of PDB entry 2O72

Structural Details of PDB entry 2O72

PDBid Chains Hinge Swapped Domain
2O72 A,B A:27-29,B:27-29 A:1-26,B:1-26

Swapped-domain interface residues and interactions:

Chains Residues
A 1, 2, 3, 4, 5, 6, 23, 24, 25, 27, 89,
B 1, 2, 3, 4, 5, 6, 23, 24, 25, 27, 89,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 78, 92, 213,
B 78, 92,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:2O72 B:2O72

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:2O72.ali
atm file:2O72.atm
cof file:2O72.cof
hbd file:2O72.hbd
html file:2O72.html
pdb file:2O72.pdb
ps file:2O72.ps
psa file:2O72.psa
rtf file:2O72.rtf
sst file:2O72.sst
tem file:2O72.tem