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Conserved Domain Database Superfamily Annotations: 2O66

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 2O66 207037 cl00412 P-II superfamily - -
2 2O66 207037 cl00412 P-II superfamily - -
Structural Details of PDB entry 2O66

Structural Details of PDB entry 2O66

PDBid Chains Hinge Swapped Domain
2O66 A,B A:108-110,B:108-110 A:111-124,B:111-124

Swapped-domain interface residues and interactions:

Chains Residues
A 90, 94, 96, 100, 101, 102, 103, 104, 105, 111, 112, 113, 114, 115, 116, 117, 119, 123, 124,
B 111, 112, 113, 114, 115, 117, 119, 123,
C 90, 94, 96, 100, 101, 102, 103, 104, 105,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 3, 6, 7, 8, 9, 10, 14, 16, 18, 24, 25, 28, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 65, 72, 74, 76, 83, 86, 93, 98, 99, 106, 107, 108, 109, 110,
B 6, 7, 8, 9, 10, 14, 16, 18, 24, 25, 28, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 65, 67, 72, 74, 76, 83, 86, 90, 93, 94, 96, 98, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 126, 127, 128, 129, 130,
C 6, 7, 8, 9, 10, 14, 16, 18, 24, 25, 28, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 65, 67, 72, 74, 76, 83, 86, 98, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 119, 123, 124,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:2O66 B:2O66 C:2O66

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:2O66.ali
atm file:2O66.atm
cof file:2O66.cof
hbd file:2O66.hbd
html file:2O66.html
pdb file:2O66.pdb
ps file:2O66.ps
psa file:2O66.psa
rtf file:2O66.rtf
sst file:2O66.sst
tem file:2O66.tem