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Pfam Domains mapped on to the structure: 2O38

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF13744 Helix-turn-helix domain PF13744 PF13744

Conserved Domain Database Superfamily Annotations: 2O38

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 2O38 210161 cl15761 HTH_XRE superfamily - -
Structural Details of PDB entry 2O38

Structural Details of PDB entry 2O38

PDBid Chains Hinge Swapped Domain
2O38 A,B A:102-105,B:102-105 A:106-116,B:106-116

Swapped-domain interface residues and interactions:

Chains Residues
A 89, 92, 93, 94, 95, 96, 97, 98, 99, 106, 109, 110, 111, 112, 113, 114, 115, 116,
B 89, 92, 93, 94, 95, 96, 97, 98, 99, 100, 106, 109, 110, 111, 112, 113, 114, 115,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 28, 31, 32, 39, 42, 80, 81, 82, 86, 88, 100, 101, 102,
B 31, 32, 35, 39, 42, 81, 82, 86, 88, 101, 102,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:2O38 B:2O38

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:2O38.ali
atm file:2O38.atm
cof file:2O38.cof
hbd file:2O38.hbd
html file:2O38.html
pdb file:2O38.pdb
ps file:2O38.ps
psa file:2O38.psa
rtf file:2O38.rtf
sst file:2O38.sst
tem file:2O38.tem