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Pfam Domains mapped on to the structure: 2O2K

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF02965 Vitamin B12 dependent methionine synthase, activation domain PF02965 PF02965

Gene Ontology Annotations: 2O2K

No. GO ID GO Description Linkout - AmiGO
1 GO:0005622 intracellular GO:0005622

Conserved Domain Database Superfamily Annotations: 2O2K

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 2O2K 111813 cl03805 Met_synt_B12 superfamily - -
2 2O2K 111813 cl03805 Met_synt_B12 superfamily - -
Structural Details of PDB entry 2O2K

Structural Details of PDB entry 2O2K

PDBid Chains Hinge Swapped Domain
2O2K A,B A:973-975,B:973-975 A:978-1000,B:978-1000

Swapped-domain interface residues and interactions:

Chains Residues
A 980, 987, 988, 989, 990, 991, 992, 998, 1000, 1071, 1178, 1227, 1228, 1229, 1231,
B 980, 987, 988, 989, 990, 991, 992, 998, 1000, 1071, 1167, 1178, 1227, 1228, 1229, 1231,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 926, 927, 976, 1067, 1069, 1070, 1076, 1077, 1079, 1115, 1116, 1117, 1118, 1120, 1165, 1166, 1177, 1226, 1232, 1263,
B 926, 927, 1067, 1069, 1070, 1076, 1077, 1079, 1115, 1116, 1117, 1118, 1120, 1165, 1166, 1177, 1226, 1232,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationASN(1071)LYS, No mutationNo mutation
BNo mutationASN(1071)LYS, No mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

B:2O2K A:2O2K

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:2O2K.ali
atm file:2O2K.atm
cof file:2O2K.cof
hbd file:2O2K.hbd
html file:2O2K.html
pdb file:2O2K.pdb
ps file:2O2K.ps
psa file:2O2K.psa
rtf file:2O2K.rtf
sst file:2O2K.sst
tem file:2O2K.tem