Home BrowseSearch Help Group

Pfam Domains mapped on to the structure: 2NV4

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF01980 Uncharacterised protein family UPF0066 PF01980 PF01980

Conserved Domain Database Superfamily Annotations: 2NV4

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 2NV4 187753 cd09281 UPF0066 - cl00749
2 2NV4 207187 cl00749 UPF0066 superfamily - -
Structural Details of PDB entry 2NV4

Structural Details of PDB entry 2NV4

PDBid Chains Hinge Swapped Domain
2NV4 A,B A:57-63,B:57-63;A:83-89,B:83-89 A:64-82,B:64-82

Swapped-domain interface residues and interactions:

Chains Residues
A 38, 40, 41, 42, 43, 44, 45, 65, 66, 74, 75, 76, 77, 79, 80, 81, 82, 121, 122, 123,
B 38, 40, 41, 43, 44, 45, 65, 66, 75, 76, 77, 79, 80, 81, 82, 121, 122, 123,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 2, 3, 4, 6, 22, 24, 25, 37, 48, 50, 52, 54, 62, 86, 87, 88, 90, 92, 94, 109, 119, 120, 124, 127, 128, 129, 130, 131, 133,
B 2, 3, 4, 6, 22, 24, 25, 37, 48, 50, 52, 54, 62, 86, 87, 88, 90, 92, 94, 119, 120, 124, 126, 127, 128, 129, 130, 131,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:2NV4 B:2NV4

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:2NV4.ali
atm file:2NV4.atm
cof file:2NV4.cof
hbd file:2NV4.hbd
html file:2NV4.html
pdb file:2NV4.pdb
ps file:2NV4.ps
psa file:2NV4.psa
rtf file:2NV4.rtf
sst file:2NV4.sst
tem file:2NV4.tem