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Pfam Domains mapped on to the structure: 2MCP

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 L PF13927 Immunoglobulin domain PF13927 PF13927

Conserved Domain Database Superfamily Annotations: 2MCP

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 2MCP 143182 cd04981 IgV_H - cl11960
2 2MCP 212623 cl11960 Ig superfamily - -
3 2MCP 143186 cd04985 IgC_CH1 - cl11960
4 2MCP 212623 cl11960 Ig superfamily - -
5 2MCP 212623 cl11960 Ig superfamily - -
Structural Details of PDB entry 2MCP

Structural Details of PDB entry 2MCP

PDBid Chains Hinge Swapped Domain
2MCP H,L H:42-46,L:47-51 H:1-41,L:1-46

Swapped-domain interface residues and interactions:

Chains Residues
H 33, 35, 39, 106, 107, 108,
L 34, 36, 38, 40, 42, 44,

Non-swapped-domain interface residues and interactions:

Chains Residues
H 44, 45, 47, 50, 61, 64, 97, 101, 103, 105, 109, 110, 112, 113, 114, 131, 132, 133, 134, 135, 136, 138, 139, 145, 149, 151, 173, 175, 176, 178, 180, 186, 188, 190,
L 49, 50, 52, 55, 56, 93, 95, 97, 100, 101, 102, 104, 105, 106, 122, 123, 124, 125, 127, 129, 130, 133, 137, 139, 141, 143, 166, 168, 169, 170, 180, 182, 184, 186, 214, 215, 217, 220,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
HNo mutationNo mutationNo mutationNo mutation
LNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

H:2MCP

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:2MCP.ali
atm file:2MCP.atm
cof file:2MCP.cof
hbd file:2MCP.hbd
html file:2MCP.html
pdb file:2MCP.pdb
ps file:2MCP.ps
psa file:2MCP.psa
rtf file:2MCP.rtf
sst file:2MCP.sst
tem file:2MCP.tem