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Pfam Domains mapped on to the structure: 2JD3

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF10784 Plasmid stability protein PF10784 PF10784

Conserved Domain Database Superfamily Annotations: 2JD3

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 2JD3 119304 cl11376 Plasmid_stab_B superfamily - -
Structural Details of PDB entry 2JD3

Structural Details of PDB entry 2JD3

PDBid Chains Hinge Swapped Domain
2JD3 A,B A:15-17,B:15-17 A:6-14,B:6-14

Swapped-domain interface residues and interactions:

Chains Residues
A 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 37, 40, 41,
B 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 37, 40, 41,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 17, 18, 21, 23, 24, 25, 27, 28, 29, 31, 39, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 58, 59, 61, 62, 65, 69, 71, 72, 74, 75, 78, 82, 84, 85, 86, 89, 90, 91, 93, 94,
B 17, 18, 21, 23, 24, 25, 27, 28, 31, 39, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 58, 59, 61, 62, 65, 69, 70, 71, 72, 74, 75, 78, 82, 84, 85, 86, 87, 89, 90, 93, 95,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:2JD3 B:2JD3

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:2JD3.ali
atm file:2JD3.atm
cof file:2JD3.cof
hbd file:2JD3.hbd
html file:2JD3.html
pdb file:2JD3.pdb
ps file:2JD3.ps
psa file:2JD3.psa
rtf file:2JD3.rtf
sst file:2JD3.sst
tem file:2JD3.tem