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Pfam Domains mapped on to the structure: 2GH8

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF00915 Calicivirus coat protein PF00915 PF00915
2 A PF00073 picornavirus capsid protein PF00073 PF00073

Conserved Domain Database Superfamily Annotations: 2GH8

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 2GH8 119412 cd00205 rhv_like - cl13999
2 2GH8 209854 cl13999 rhv_like superfamily - -
Structural Details of PDB entry 2GH8

Structural Details of PDB entry 2GH8

PDBid Chains Hinge Swapped Domain
2GH8 A,C,B A:190-201,C:190-201,B:190-201 A:160-189,C:160-189,B:163-189

Swapped-domain interface residues and interactions:

Chains Residues

Non-swapped-domain interface residues and interactions:

Chains Residues

Swapped domains are represented using trasperent spheres.
Non-swapped part is reprented using light color and cartoon reprentation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
CNo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo Jmol_logo

2D-plot:

3:2GH8 3:2GH8 A:2GH8 B:2GH8 C:2GH8

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:2GH8.ali
atm file:2GH8.atm
pdb file:2GH8.pdb
psa file:2GH8.psa
sst file:2GH8.sst