Pfam Domains mapped on to the structure: 2GE7
No.
Chain ID
Pfam ID
Pfam Description
Linkout - Pfam
Linkout - CDD
1
A
PF00937
Coronavirus nucleocapsid protein
PF00937
PF00937
Gene Ontology Annotations: 2GE7
Conserved Domain Database Superfamily Annotations: 2GE7
Structural Details of PDB entry 2GE7
Structural Details of PDB entry 2GE7
PDBid Chains Hinge Swapped Domain
2GE7
A,B
A:56-59,B:56-59;A:74-77,B:74-77
A:60-73,B:60-73
Swapped-domain interface residues and interactions:
Chains Residues
A
10 , 11 , 13 , 14 , 24 , 30 , 31 , 32 , 33 , 34 , 35 , 54 , 57 , 59 , 60 , 61 , 62 , 63 , 64 , 65 , 66 , 67 , 68 , 69 , 71 , 73 , 102 , 106 ,
B
10 , 11 , 13 , 14 , 24 , 30 , 31 , 32 , 33 , 34 , 35 , 54 , 57 , 60 , 61 , 62 , 63 , 64 , 65 , 66 , 67 , 68 , 69 , 71 , 73 , 106 ,
Non-swapped-domain interface residues and interactions:
Chains Residues
A
8 , 9 , 20 , 45 , 50 , 53 , 55 , 56 , 58 , 74 , 75 , 76 , 77 , 78 , 79 , 80 , 81 , 82 , 83 , 84 , 85 , 86 , 87 , 88 , 89 , 90 , 92 , 95 , 98 , 99 , 114 ,
B
8 , 9 , 20 , 27 , 45 , 50 , 53 , 55 , 56 , 58 , 59 , 74 , 75 , 76 , 77 , 78 , 79 , 80 , 81 , 82 , 83 , 84 , 85 , 86 , 87 , 88 , 89 , 90 , 92 , 95 , 98 , 99 , 102 ,
Mutations in critical regions:
Chains
Hinge
Domain swapped interface Non-swapped interface Swapped Domain
A No mutation No mutation No mutation No mutation B No mutation No mutation No mutation No mutation B No mutation No mutation No mutation No mutation
HIDE output:
JMOL Visualization:
2D-plot:
JOY Structural annotation for hinge hinge and swapped domain:
JOY output:
