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Pfam Domains mapped on to the structure: 2G2S

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF01353 Green fluorescent protein PF01353 PF01353
2 B PF01353 Green fluorescent protein PF01353 PF01353

Gene Ontology Annotations: 2G2S

No. GO ID GO Description Linkout - AmiGO
1 GO:0008218 bioluminescence GO:0008218

Conserved Domain Database Superfamily Annotations: 2G2S

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 2G2S 201744 GFP superfamily N -
Structural Details of PDB entry 2G2S

Structural Details of PDB entry 2G2S

PDBid Chains Hinge Swapped Domain
2G2S A,B A:49-52,B:49-52 A:53-65,B:53-65

Swapped-domain interface residues and interactions:

Chains Residues
A 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63,
B 67, 136, 137, 139, 141, 143, 145, 216, 218,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 2, 3, 4, 5, 7, 8, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 25, 35, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 51, 52,
B 68, 70, 71, 73, 79, 85, 86, 88, 89, 96, 98, 106, 108, 114, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 130, 132, 169, 181, 194, 207, 210, 213, 215, 217, 219, 220, 221, 222, 223, 224,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationLEU(64)PHE, GLY(65)SER,
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:2G2S B:2G2S

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:2G2S.ali
atm file:2G2S.atm
cof file:2G2S.cof
hbd file:2G2S.hbd
html file:2G2S.html
pdb file:2G2S.pdb
ps file:2G2S.ps
psa file:2G2S.psa
rtf file:2G2S.rtf
sst file:2G2S.sst
tem file:2G2S.tem