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Conserved Domain Database Superfamily Annotations: 2FRH

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 2FRH 212173 cl00088 HTH superfamily - -
Structural Details of PDB entry 2FRH

Structural Details of PDB entry 2FRH

PDBid Chains Hinge Swapped Domain
2FRH A,B A:107-111,B:107-111 A:98-105,B:98-105

Swapped-domain interface residues and interactions:

Chains Residues
A 100, 101, 103, 104, 105, 111, 115,
B 100, 101, 103, 104, 105, 111, 115,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 106, 107, 108, 109, 110, 112, 113, 114, 116, 117, 118, 119, 120, 121, 122, 123, 134, 137, 138, 141, 145, 160, 161, 162, 208, 212, 215, 216, 219, 224,
B 106, 107, 108, 109, 110, 112, 113, 114, 116, 117, 118, 119, 120, 121, 122, 123, 134, 137, 138, 141, 145, 160, 161, 162, 208, 212, 215, 216, 219, 223,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationHIS(100)-, MET(101)-, No mutationGLY(98)-, SER(99)-, HIS(100)-, MET(101)-,
BNo mutationHIS(100)-, MET(101)-, No mutationGLY(98)-, SER(99)-, HIS(100)-, MET(101)-,

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:2FRH B:2FRH

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:2FRH.ali
atm file:2FRH.atm
cof file:2FRH.cof
hbd file:2FRH.hbd
html file:2FRH.html
pdb file:2FRH.pdb
ps file:2FRH.ps
psa file:2FRH.psa
rtf file:2FRH.rtf
sst file:2FRH.sst
tem file:2FRH.tem