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Structural Details of PDB entry 2FDO

Structural Details of PDB entry 2FDO

PDBid Chains Hinge Swapped Domain
2FDO A,B A:72-76,B:72-76 A:77-92,B:77-92

Swapped-domain interface residues and interactions:

Chains Residues
A 22, 23, 24, 25, 26, 58, 59, 60, 61, 62, 72, 77, 78, 79, 80, 82, 83, 84, 86, 87, 91,
B 22, 23, 24, 25, 26, 58, 59, 60, 61, 62, 72, 77, 78, 79, 80, 81, 82, 83, 84, 86, 87, 92,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 0, 2, 3, 4, 5, 6, 7, 8, 11, 12, 15, 16, 18, 19, 21, 27, 28, 29, 30, 31, 32, 34, 35, 36, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 64, 67, 68, 73, 74, 75, 76,
B 0, 2, 3, 4, 5, 6, 7, 8, 11, 12, 15, 18, 19, 20, 21, 27, 28, 29, 30, 31, 32, 34, 35, 36, 37, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 63, 64, 66, 67, 68, 73, 74, 75, 76,

Swapped domains are represented using trasperent spheres.
Non-swapped part is reprented using light color and cartoon reprentation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo Jmol_logo

2D-plot:

3:2FDO A:2FDO

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:2FDO.ali
atm file:2FDO.atm
cof file:2FDO.cof
hbd file:2FDO.hbd
html file:2FDO.html
pdb file:2FDO.pdb
ps file:2FDO.ps
psa file:2FDO.psa
rtf file:2FDO.rtf
sst file:2FDO.sst
tem file:2FDO.tem