Home BrowseSearch Help Group

Pfam Domains mapped on to the structure: 2F5G

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF01797 Transposase IS200 like PF01797 PF01797

Conserved Domain Database Superfamily Annotations: 2F5G

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 2F5G 207217 cl00848 Y1_Tnp superfamily - -
Structural Details of PDB entry 2F5G

Structural Details of PDB entry 2F5G

PDBid Chains Hinge Swapped Domain
2F5G A,B A:110-113,B:110-113 A:114-131,B:114-131

Swapped-domain interface residues and interactions:

Chains Residues
A 118, 121, 122, 123, 125, 126, 129, 131,
B 22, 23, 25, 117, 118, 121, 122, 123, 125, 126, 129, 130,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 3, 7, 8, 9, 10, 12, 13, 15, 16, 18, 20, 22, 23, 25, 59, 60, 62, 69, 70, 72, 73, 74, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113,
B 3, 8, 9, 10, 12, 13, 15, 16, 18, 20, 59, 60, 62, 69, 70, 72, 73, 74, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:2F5G B:2F5G

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:2F5G.ali
atm file:2F5G.atm
cof file:2F5G.cof
hbd file:2F5G.hbd
html file:2F5G.html
pdb file:2F5G.pdb
ps file:2F5G.ps
psa file:2F5G.psa
rtf file:2F5G.rtf
sst file:2F5G.sst
tem file:2F5G.tem