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Pfam Domains mapped on to the structure: 2D6Y

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF00440 Bacterial regulatory proteins, tetR family PF00440 PF00440
Structural Details of PDB entry 2D6Y

Structural Details of PDB entry 2D6Y

PDBid Chains Hinge Swapped Domain
2D6Y A,B A:157-161,B:157-161 A:162-191,B:162-191

Swapped-domain interface residues and interactions:

Chains Residues
A 103, 107, 108, 118, 121, 141, 144, 145, 162, 164, 165, 166, 167, 168, 177, 178, 181, 182, 184, 185, 188, 189, 191,
B 103, 107, 108, 118, 121, 141, 144, 145, 162, 164, 165, 166, 167, 168, 177, 178, 181, 182, 184, 185, 188, 189,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 99, 100, 101, 102, 109, 111, 114, 117, 125, 138, 140, 142, 147, 148, 149, 151, 152, 155, 156, 157, 159, 160, 161, 192,
B 99, 100, 101, 109, 111, 114, 117, 138, 140, 147, 148, 149, 151, 152, 155, 156, 157, 159, 160, 161,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:2D6Y B:2D6Y

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:2D6Y.ali
atm file:2D6Y.atm
cof file:2D6Y.cof
hbd file:2D6Y.hbd
html file:2D6Y.html
pdb file:2D6Y.pdb
ps file:2D6Y.ps
psa file:2D6Y.psa
rtf file:2D6Y.rtf
sst file:2D6Y.sst
tem file:2D6Y.tem