Home BrowseSearch Help Group

Pfam Domains mapped on to the structure: 2D5M

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF01613 Flavin reductase like domain PF01613 PF01613

Conserved Domain Database Superfamily Annotations: 2D5M

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 2D5M 207200 cl00801 FlaRed superfamily - -
Structural Details of PDB entry 2D5M

Structural Details of PDB entry 2D5M

PDBid Chains Hinge Swapped Domain
2D5M A,B A:-,B:- A:1--1,B:1--1

Swapped-domain interface residues and interactions:

Chains Residues

Non-swapped-domain interface residues and interactions:

Chains Residues
A 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 17, 35, 36, 37, 38, 39, 40, 41, 45, 49, 70, 73, 76, 77, 80, 81, 83, 84, 85, 110, 112, 116, 118, 124, 126, 131, 133, 135, 138, 139, 140, 141, 142, 143, 144, 145, 148, 149, 152, 153, 154, 156, 161, 162, 163, 164, 165, 167, 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 184, 185, 186,
B 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 17, 35, 36, 37, 38, 39, 40, 41, 45, 49, 70, 73, 76, 77, 80, 81, 83, 84, 85, 110, 112, 116, 118, 124, 126, 131, 133, 135, 138, 139, 140, 141, 142, 143, 144, 145, 148, 149, 152, 153, 154, 156, 161, 162, 163, 164, 165, 167, 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180, 181, 182, 184, 185,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:2D5M B:2D5M

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:2D5M.ali
atm file:2D5M.atm
cof file:2D5M.cof
hbd file:2D5M.hbd
html file:2D5M.html
pdb file:2D5M.pdb
ps file:2D5M.ps
psa file:2D5M.psa
rtf file:2D5M.rtf
sst file:2D5M.sst
tem file:2D5M.tem