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Pfam Domains mapped on to the structure: 2D4P

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF09390 Protein of unknown function (DUF1999) PF09390 PF09390

Conserved Domain Database Superfamily Annotations: 2D4P

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 2D4P 117932 cl09640 DUF1999 superfamily - -
Structural Details of PDB entry 2D4P

Structural Details of PDB entry 2D4P

PDBid Chains Hinge Swapped Domain
2D4P A,B A:121-122,B:121-122 A:123-130,B:123-130

Swapped-domain interface residues and interactions:

Chains Residues
A 88, 91, 93, 94, 95, 96, 97, 98, 99, 114, 115, 116, 117, 123, 124, 125, 126, 127, 128, 129, 130,
B 88, 91, 93, 94, 95, 96, 97, 98, 99, 114, 115, 116, 117, 123, 124, 125, 126, 127, 128, 129,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 24, 26, 27, 30, 31, 53, 55, 56, 57, 58, 64, 66, 84, 89, 92, 100, 101, 113, 119, 120, 121, 122,
B 24, 26, 27, 30, 31, 53, 55, 56, 57, 58, 64, 66, 84, 89, 92, 100, 101, 113, 119, 120, 121, 122,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:2D4P B:2D4P

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:2D4P.ali
atm file:2D4P.atm
cof file:2D4P.cof
hbd file:2D4P.hbd
html file:2D4P.html
pdb file:2D4P.pdb
ps file:2D4P.ps
psa file:2D4P.psa
rtf file:2D4P.rtf
sst file:2D4P.sst
tem file:2D4P.tem