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Conserved Domain Database Superfamily Annotations: 2D00

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 2D00 207142 cl00632 ATP-synt_F superfamily - -
Structural Details of PDB entry 2D00

Structural Details of PDB entry 2D00

PDBid Chains Hinge Swapped Domain
2D00 F,A F:63-66,A:63-66 F:67-109,A:67-109

Swapped-domain interface residues and interactions:

Chains Residues
A 3, 4, 14, 21, 47, 48, 49, 50, 51, 52, 53, 54, 57, 67, 68, 69, 71, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 86, 91, 92, 95, 99, 107, 108, 109,
F 4, 14, 21, 42, 47, 48, 49, 50, 51, 52, 53, 54, 67, 68, 69, 71, 73, 74, 75, 76, 77, 78, 79, 80, 82, 83, 86, 91, 92, 95, 99, 107, 108,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 1, 6, 8, 11, 17, 18, 23, 38, 42, 43, 60, 64,
F 1, 6, 8, 11, 17, 18, 23, 38, 43, 57, 60, 64,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
FNo mutationVAL(4)-, MET(1)-, No mutation
ANo mutationPRO(3)-, VAL(4)-, MET(1)-, No mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

F:2D00

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:2D00.ali
atm file:2D00.atm
cof file:2D00.cof
hbd file:2D00.hbd
html file:2D00.html
pdb file:2D00.pdb
ps file:2D00.ps
psa file:2D00.psa
rtf file:2D00.rtf
sst file:2D00.sst
tem file:2D00.tem