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Pfam Domains mapped on to the structure: 2AYB

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF00511 E2 (early) protein, C terminal PF00511 PF00511

Conserved Domain Database Superfamily Annotations: 2AYB

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 2AYB 201274 cl02882 PPV_E2_C superfamily - -
Structural Details of PDB entry 2AYB

Structural Details of PDB entry 2AYB

PDBid Chains Hinge Swapped Domain
2AYB A,B A:316-317,B:316-317;A:328-329,B:328-329 A:318-327,B:318-327

Swapped-domain interface residues and interactions:

Chains Residues
A 304, 312, 313, 314, 315, 318, 319, 320, 321, 322, 323, 325, 366,
B 304, 312, 313, 314, 315, 318, 319, 320, 321, 322, 323, 325,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 286, 288, 300, 307, 311, 317, 332, 357, 358, 359, 360, 361, 362, 364, 365,
B 286, 288, 300, 307, 311, 317, 332, 357, 358, 359, 360, 361, 362, 364, 365,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationMET(361)LEU, No mutation
BNo mutationNo mutationMET(361)LEU, No mutation
BNo mutationNo mutationMET(361)LEU, No mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:2AYB B:2AYB

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:2AYB.ali
atm file:2AYB.atm
cof file:2AYB.cof
hbd file:2AYB.hbd
html file:2AYB.html
pdb file:2AYB.pdb
ps file:2AYB.ps
psa file:2AYB.psa
rtf file:2AYB.rtf
sst file:2AYB.sst
tem file:2AYB.tem